AbMPNN

5-30 minutesPaperCodeNeed Code Links

Antibody sequence design

Readiness

Readiness: Need Code Links
Smoke: not_tested
Artifacts: not_applicable
Production: need_code_links_exact_upstream_runtime_missing
Storage: <5GB
Strategy: pause; identify exact ABMPNN inference code/wrapper before install
Next: Find/confirm the exact ABMPNN inference repo/script or approved ProteinMPNN-compatible wrapper, then stage Zenodo files and run a small antibody PDB Slurm smoke with artifacts.

SOP main-thread queried Zenodo record 8164693 for ABMPNN / Inverse folding for antibody sequence design using deep learning. Files are small: abmpnn.pt 20,042,525 bytes, oas_splits.csv 3,420,228 bytes, sabdab_splits.csv 85,341 bytes. No source/runtime wrapper was installed in this turn; likely needs matching ProteinMPNN/antibody inverse-folding code path and benchmark input. Storage is <5GB but runner adapter and exact upstream execution script are pending. 2026-07-07 16:09 +0800: SOP Runner Adapter Pending audit: demoted from Runner Adapter Pending because only Zenodo ABMPNN weights/split files are identified; no source/runtime wrapper is installed and no small Slurm benchmark has passed. 2026-07-07 17:31 +0800: SOP Runner Adapter/Blocked pass: moved from Production Blocked to Need Code Links because only Zenodo weights/split files are identified; no exact upstream inference repository/script or approved ProteinMPNN-compatible ABMPNN wrapper is confirmed.