Bio Mega Server

Dashboard Workspace Tools Jobs

GPU backend: Boltz-2 submits through the Slurm/Singularity runner adapter. Other tools stay visible until their adapters are configured.

Back

Sequence Analysis & Annotation

StrucTFactor (from NS)

Need Code Links

StrucTFactor leverages 3D protein structures for precise transcription factor prediction, outperforming existing methods.

Job Name

Log in to submit jobs to the Slurm backend.

EXAMPLES

Protein SequenceProtein Structure *Chain

Source: NeuroSnap.

Readiness

Readiness: Need Code Links
Smoke: not_tested
Artifacts: not_applicable
Production: not_started
Storage: not listed
Strategy: pause; identify upstream code
Next: Find/confirm exact upstream code link before install.

No code link in catalog; pause until upstream package/repo is identified.

DNA Chisel Sequence Optimizer (from NS)

DnaChisel edits DNA sequences to satisfy biological constraints and optimize properties like codon usage, motif distribution, and GC content.

Sequence Analysis & Annotation

CodonTransformer (from NS)

A deep learning-based tool for multispecies codon optimization.

Sequence Analysis & Annotation

TIsigner Expression Optimization (from NS)

A nucleotide sequence based method for optimizing protein expression.

Sequence Analysis & Annotation

Razor Signal Peptide Detection (from NS)

A sequence based method for detecting signal peptides.

Sequence Analysis & Annotation

WoLF PSORT Protein Localization (from NS)

Predicts subcellular localization sites from protein sequence.

Sequence Analysis & Annotation