RhoDesign

secondsPaperCodeNeed >5GB

Deep generative design of RNA sequences from 3D structure

Readiness

Readiness: Need >5GB
Smoke: not_tested
Artifacts: not_applicable
Production: need_gt5gb_rna_design_pytorch_pyg_cuda_pending
Storage: 5-20GB
Strategy: shared RNA-design CUDA PyTorch/PyG SIF + checkpoint overlay
Next: Build/reuse shared RNA-design PyTorch/PyG CUDA SIF, stage public RhoDesign checkpoints, run upstream example/2zh6_B.pdb Slurm benchmark, then wire adapter.

No obvious large model/database dependency identified; validate upstream docs before install. 2026-07-05 SOP batch recheck: backend inventory found no staged RhoDesign source/checkpoints/SIF/artifacts/runner. Upstream uses Ubuntu/CUDA PyTorch/PyG stack and public checkpoint/data downloads, so it should move to the 5-20GB shared RNA-design runtime phase. Reclassified from Smoke Pending to Need >5GB.