Protein Solubilization

PaperCodeNeed Code Links

Solubilize membrane proteins

Readiness

Readiness: Need Code Links
Smoke: not_tested
Artifacts: not_applicable
Production: need_code_links_exact_upstream_runtime_missing
Storage: <5GB
Strategy: pause; identify official Protein-Sol upstream package/API or approved replacement before install
Next: Locate and document the official downloadable Protein-Sol package/API or approve a documented replacement; then install the real runner, run a Slurm benchmark, and remove the heuristic proxy before promotion.

SOP agent found likely canonical Protein-Sol source is University of Manchester Protein-Sol citing Hebditch et al. 2017 Bioinformatics, but no direct downloadable upstream artifact/revision was validated. Tool path /media/nik/seagate_nik/bio_server/tools/protein-sol appears empty. Existing shared runner implementation is a heuristic amino-acid composition formula producing protein_sol_score, not a real upstream Protein-Sol runner. Prior direct artifacts exist from an earlier heuristic batch, but no fresh completed real Slurm benchmark or upstream package artifacts were validated. 2026-07-07 17:31 +0800: SOP Runner Adapter/Blocked pass: moved from Production Blocked to Need Code Links because the recorded ColabDesign link is not the validated canonical Protein-Sol source; tool path is empty and prior outputs were heuristic proxy evidence, not a real upstream Protein-Sol runner.