FlashABB

secondsPaperCodeProduction Ready

Fast antibody structure, developability, and embeddings

Readiness

Readiness: Production Ready
Smoke: passed
Artifacts: passed
Production: production_pass
Storage: <5
Strategy: shared python312_slim.sif + tool ext3 overlay
Next: Production Ready. Optional next hardening: expose heavy/light sequence UI controls and GPU option for larger batch inference.

No obvious large model/database dependency identified; validate upstream docs before install. Production evidence 2026-07-01: source https://github.com/oxpig/FlashABB revision 8e0ff3e staged at /media/nik/seagate_nik/bio_server/tools/flashabb/source. Worker Slurm job 272 passed using shared python312_slim.sif, shared Torch CPU site-packages, and tool deps_py312; produced flashabb_benchmark.pdb with 1795 atom records. Web runner adapter was wired to runner_tool flashabb and submitted through cluster runner API as Slurm job 275, remote id 081506aea705. Runtime_seconds 3.544. Artifacts: flashabb_benchmark.pdb, results.csv, summary.json, run_flashabb.py, stdout/stderr, Slurm logs. Sanity: coords_shape [1,233,14,3], bb_coords_shape [1,233,4,3], heavy_length 121, light_length 112, atom_record_count 1795.