deepSTABp

secondsPaperCodeNeed >5GB

Predict protein melting temperature

Readiness

Readiness: Need >5GB
Smoke: not_tested
Artifacts: not_applicable
Production: source_materialized_need_prott5_runtime_gt5gb
Storage: <5
Strategy: shared TensorFlow SIF + tool ext3 overlay
Next: Build or obtain deepstabp_py39_torch113_prott5 shared SIF and cache required ProtT5/model assets, then run direct DeepSTABp Slurm smoke before adding runner wiring.

DeepSTABp clone from GitLab timed out/hung and left only a partial ~256 KB source directory; no reliable revision, environment, benchmark, or artifacts available. 2026-07-04 backend update: official GitLab clone hung in index-pack; stopped the stuck clone and cleanly materialized the documented CSBiology/deepStabP mirror at /media/nik/seagate_nik/bio_server/tools/deepstabp/source, rev 87acc74a2d88745fcbedf75335922e2a02b68de1. Runtime remains blocked by Python 3.9 PyTorch/Transformers/Lightning plus ProtT5/model cache, likely >5GB.