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GPU backend: Boltz-2 submits through the Slurm/Singularity runner adapter. Other tools stay visible until their adapters are configured.

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Structure Prediction & Folding

Boltz-1 (AlphaFold3) (from NS)

Need Code Links

An open-source version of AlphaFold3 developed by an MIT lab.

Job Name

Log in to submit jobs to the Slurm backend.

EXAMPLES

Molecules *MSA File

SamplesRecycles Use MSA

Source: NeuroSnap.

Readiness

Readiness: Need Code Links
Smoke: not_tested
Artifacts: not_applicable
Production: not_started
Storage: not listed
Strategy: pause; identify upstream code
Next: Find/confirm exact upstream code link before install.

No code link in catalog; pause until upstream package/repo is identified.

LMI4Boltz (from NS)

Boltz-2-compatible low-memory fork with extra chunking and bfloat16 controls.

Structure Prediction & Folding

RoseTTAFold2 (from NS)

Protein structure prediction that's faster than AlphaFold2 and just as accurate.

Structure Prediction & Folding

RoseTTAFold All-Atom (from NS)

Protein folding model that supports proteins, nucleotides, ligands, metal ions, and other small molecules.

Structure Prediction & Folding

CryoAtom Cryo-EM Model Builder (from NS)

CryoAtom builds atomic models from cryo-EM maps using local attention and 3D rotary position embedding, improving model completeness and speed while lowering resolution requirements.

Structure Prediction & Folding

DeepEMhancer (from NS)

DeepEMhancer is a deep learning approach for automatic post-processing of cryo-EM maps, performing masking and sharpening in a single step to improve interpretability.

Structure Prediction & Folding